Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC8535_04463 | Not Available | Negative | 4706157 - 4706384 | 8516.87 |
| uncharacterised protein | NCTC8535_04464 | Not Available | Negative | 4706851 - 4708203 | 51089.1 |
| antitoxin higa-1 | NCTC8535_04465 | Not Available | Negative | 4708386 - 4708700 | 11796.2 |
| helix-turn-helix | NCTC8535_04466 | Not Available | Negative | 4708993 - 4709253 | 10015.1 |
| transposase and inactivated derivatives | NCTC8535_04467 | Not Available | Negative | 4709893 - 4710168 | 9956.03 |
| transposase dde domain | NCTC8535_04468 | Not Available | Positive | 4710265 - 4711197 | 35075.9 |
| putative fimbrial protein staf | NCTC8535_04469 | Not Available | Positive | 4711602 - 4712210 | 20811.2 |
| chaperone protein focc precursor | NCTC8535_04470 | Not Available | Positive | 4712306 - 4713007 | 25162.1 |
| heat shock protein e | NCTC8535_04471 | Not Available | Positive | 4713019 - 4715505 | 90776.5 |
| fimbrial subunit type 1 precursor | NCTC8535_04472 | Not Available | Positive | 4715496 - 4716491 | 35035.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


