Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit 3 | NCTC8535_04252 | Not Available | Negative | 4500424 - 4501044 | 22869.1 |
| ubiquinol oxidase subunit 1 | NCTC8535_04253 | Not Available | Negative | 4501034 - 4503025 | 74148.8 |
| ubiquinol oxidase subunit 2 precursor | NCTC8535_04254 | Not Available | Negative | 4503029 - 4503958 | 34177.6 |
| muropeptide transporter | NCTC8535_04255 | Not Available | Negative | 4504560 - 4506041 | 53658.0 |
| uncharacterized lipoprotein | NCTC8535_04256 | Not Available | Negative | 4506156 - 4506782 | 22624.1 |
| transcriptional regulator bola | NCTC8535_04257 | Not Available | Positive | 4507235 - 4507549 | 11787.9 |
| trigger factor | NCTC8535_04258 | Not Available | Positive | 4508128 - 4509432 | 48260.5 |
| atp-dependent clp protease proteolytic subunit precursor | NCTC8535_04259 | Not Available | Positive | 4509667 - 4510287 | 22982.9 |
| atp-dependent clp protease atp-binding subunit clpx | NCTC8535_04260 | Not Available | Positive | 4510565 - 4511836 | 46268.6 |
| lon protease | NCTC8535_04262 | Not Available | Positive | 4512027 - 4514381 | 87436.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


