Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | NCTC8535_04242 | Not Available | Negative | 4490278 - 4492143 | 67427.4 |
| farnesyl diphosphate synthase | NCTC8535_04243 | Not Available | Negative | 4492312 - 4493217 | 32317.8 |
| exodeoxyribonuclease 7 small subunit | NCTC8535_04244 | Not Available | Negative | 4493221 - 4493463 | 8886.32 |
| trna sulfurtransferase | NCTC8535_04245 | Not Available | Positive | 4493723 - 4495171 | 54933.3 |
| chaperone protein yajl | NCTC8535_04246 | Not Available | Negative | 4495292 - 4495885 | 21138.6 |
| 2-dehydropantoate 2-reductase | NCTC8535_04247 | Not Available | Negative | 4495848 - 4496762 | 33749.6 |
| putative nucleotide-binding protein | NCTC8535_04248 | Not Available | Positive | 4496950 - 4497441 | 18310.8 |
| inner membrane transport protein yajr | NCTC8535_04249 | Not Available | Negative | 4497531 - 4498901 | 49181.8 |
| protoheme ix farnesyltransferase | NCTC8535_04250 | Not Available | Negative | 4499170 - 4500060 | 32022.3 |
| cytochrome o ubiquinol oxidase protein cyod | NCTC8535_04251 | Not Available | Negative | 4500074 - 4500424 | 12858.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


