Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulatory protein zrar | NCTC8535_04202 | Not Available | Positive | 4442804 - 4445047 | 83661.1 |
| uncharacterised protein | NCTC8535_04203 | Not Available | Positive | 4445337 - 4446029 | 24300.5 |
| uncharacterised protein | NCTC8535_04204 | Not Available | Positive | 4446100 - 4446765 | 23327.7 |
| probable peroxiredoxin | NCTC8535_04205 | Not Available | Negative | 4446829 - 4447431 | 22267.6 |
| acyl carrier protein phosphodiesterase | NCTC8535_04206 | Not Available | Negative | 4447654 - 4448235 | 22580.4 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | NCTC8535_04207 | Not Available | Positive | 4448423 - 4449496 | 39482.0 |
| queuine trna-ribosyltransferase | NCTC8535_04208 | Not Available | Positive | 4449652 - 4450779 | 42563.3 |
| preprotein translocase subunit yajc | NCTC8535_04209 | Not Available | Positive | 4450881 - 4451213 | 11858.8 |
| preprotein translocase subunit secd | NCTC8535_04210 | Not Available | Positive | 4451274 - 4453097 | 65397.6 |
| preprotein translocase subunit secf | NCTC8535_04211 | Not Available | Positive | 4453108 - 4454079 | 35367.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


