Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional repressor aser | NCTC8535_04141 | Not Available | Positive | 4374107 - 4374457 | 12973.0 |
| arsenic efflux pump protein | NCTC8535_04142 | Not Available | Positive | 4374516 - 4375805 | 45903.7 |
| arsenate reductase | NCTC8535_04143 | Not Available | Positive | 4375818 - 4376243 | 15686.1 |
| uncharacterized hth-type transcriptional regulator yjir | NCTC8535_04144 | Not Available | Negative | 4376376 - 4377962 | 60040.9 |
| putative transporter | NCTC8535_04145 | Not Available | Negative | 4377981 - 4379669 | 59196.1 |
| c4-dicarboxylate transport sensor protein dctb | NCTC8535_04146 | Not Available | Positive | 4380115 - 4381947 | 68698.4 |
| c4-dicarboxylate transport transcriptional regulatory protein dctd | NCTC8535_04147 | Not Available | Positive | 4381961 - 4383277 | 48778.1 |
| predicted membrane protein | NCTC8535_04148 | Not Available | Negative | 4383494 - 4384204 | 26781.3 |
| dna-binding transcriptional regulator soxs | NCTC8535_04149 | Not Available | Positive | 4384667 - 4385008 | 13293.1 |
| nadp-dependent alcohol dehydrogenase c 2 | NCTC8535_04150 | Not Available | Positive | 4385216 - 4386235 | 36508.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


