Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | NCTC8535_04036 | Not Available | Positive | 4262535 - 4263329 | 30295.2 |
| tfp pilus assembly protein fimt | NCTC8535_04037 | Not Available | Positive | 4263571 - 4264029 | 16735.4 |
| type ii secretory pathway, component pulj | NCTC8535_04038 | Not Available | Positive | 4264020 - 4264601 | 21519.1 |
| uncharacterised protein | NCTC8535_04039 | Not Available | Positive | 4264598 - 4265065 | 16907.7 |
| tfp pilus assembly protein pilv | NCTC8535_04040 | Not Available | Positive | 4265059 - 4265313 | 9735.08 |
| exodeoxyribonuclease v gamma chain | NCTC8535_04041 | Not Available | Positive | 4265595 - 4268966 | 129410.0 |
| protease 3 precursor | NCTC8535_04042 | Not Available | Positive | 4269136 - 4272042 | 108265.0 |
| exodeoxyribonuclease v beta chain | NCTC8535_04043 | Not Available | Positive | 4272042 - 4275617 | 134493.0 |
| exodeoxyribonuclease v alpha chain | NCTC8535_04044 | Not Available | Positive | 4275611 - 4277470 | 68121.9 |
| amino-acid acetyltransferase | NCTC8535_04045 | Not Available | Negative | 4277508 - 4278836 | 49207.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


