Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate transport system permease protein cysw | NCTC8535_03933 | Not Available | Negative | 4145843 - 4147447 | 59467.8 |
| thiamine-binding periplasmic protein precursor | NCTC8535_03934 | Not Available | Negative | 4147423 - 4148418 | 36761.2 |
| hth-type transcriptional regulator sgrr | NCTC8535_03935 | Not Available | Negative | 4148752 - 4150470 | 66678.8 |
| sugar efflux transporter a | NCTC8535_03937 | Not Available | Positive | 4150707 - 4151885 | 42383.7 |
| inner membrane protein ybhi | NCTC8535_03938 | Not Available | Positive | 4152132 - 4153604 | 52271.3 |
| 3-isopropylmalate dehydratase small subunit 1 | NCTC8535_03939 | Not Available | Negative | 4153734 - 4154336 | 22418.5 |
| 3-isopropylmalate dehydratase large subunit | NCTC8535_03940 | Not Available | Negative | 4154352 - 4155764 | 50147.1 |
| 3-isopropylmalate dehydrogenase | NCTC8535_03941 | Not Available | Negative | 4155767 - 4156858 | 39333.1 |
| 2-isopropylmalate synthase | NCTC8535_03942 | Not Available | Negative | 4156861 - 4158447 | 57878.7 |
| hth-type transcriptional regulator leuo | NCTC8535_03944 | Not Available | Positive | 4159233 - 4160186 | 36010.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


