Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dnaj-like protein djla | NCTC8535_03923 | Not Available | Positive | 4134088 - 4134921 | 31062.8 |
| protein of uncharacterised function (duf3343) | NCTC8535_03924 | Not Available | Negative | 4134977 - 4135225 | 9312.22 |
| 2-hydroxyglutaryl-coa dehydratase component a | NCTC8535_03925 | Not Available | Negative | 4135215 - 4136003 | 27567.1 |
| benzoyl-coa reductase subunit c | NCTC8535_03926 | Not Available | Negative | 4136014 - 4137165 | 42770.2 |
| ribosomal large subunit pseudouridine synthase a | NCTC8535_03927 | Not Available | Negative | 4137331 - 4138068 | 27459.2 |
| rna polymerase-associated protein rapa | NCTC8535_03928 | Not Available | Negative | 4138068 - 4140974 | 109739.0 |
| dna polymerase ii | NCTC8535_03929 | Not Available | Negative | 4141205 - 4143559 | 89922.5 |
| uncharacterised protein | NCTC8535_03930 | Not Available | Negative | 4143706 - 4144128 | 15863.4 |
| inner membrane protein yabi | NCTC8535_03931 | Not Available | Positive | 4144376 - 4145143 | 28552.0 |
| thiamine import atp-binding protein thiq | NCTC8535_03932 | Not Available | Negative | 4145151 - 4145846 | 24927.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


