Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cytochrome d ubiquinol oxidase subunit 3 | NCTC8535_03819 | Not Available | Negative | 4009600 - 4009995 | 15153.9 |
| afg1-like atpase | NCTC8535_03820 | Not Available | Positive | 4010405 - 4011553 | 43761.9 |
| 50s ribosomal protein l13 | NCTC8535_03821 | Not Available | Positive | 4011845 - 4012273 | 16044.5 |
| 30s ribosomal protein s9 | NCTC8535_03822 | Not Available | Positive | 4012289 - 4012681 | 14810.0 |
| stringent starvation protein a | NCTC8535_03823 | Not Available | Positive | 4013029 - 4013670 | 24602.9 |
| stringent starvation protein b | NCTC8535_03824 | Not Available | Positive | 4013673 - 4014170 | 18367.8 |
| uncharacterized hth-type transcriptional regulator ybbh | NCTC8535_03825 | Not Available | Negative | 4014319 - 4015200 | 31727.4 |
| uncharacterized protein, yhch/yjgk/yial family | NCTC8535_03826 | Not Available | Negative | 4015376 - 4015846 | 17648.0 |
| n-acetylmannosamine kinase | NCTC8535_03827 | Not Available | Negative | 4015859 - 4016743 | 30621.8 |
| putative n-acetylmannosamine-6-phosphate 2-epimerase | NCTC8535_03828 | Not Available | Negative | 4016756 - 4017436 | 24085.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


