Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine kinase | NCTC8535_03560 | Not Available | Positive | 3701750 - 3702868 | 40232.6 |
| pseudouridine-5'-phosphate glycosidase | NCTC8535_03561 | Not Available | Positive | 3702865 - 3703803 | 33148.8 |
| nucleoside permease nupx | NCTC8535_03562 | Not Available | Positive | 3704055 - 3705326 | 44116.3 |
| inner membrane protein ycdz | NCTC8535_03563 | Not Available | Positive | 3705323 - 3705799 | 16931.1 |
| uncharacterized conserved protein | NCTC8535_03564 | Not Available | Positive | 3706002 - 3706430 | 16142.3 |
| uncharacterized protein conserved in bacteria | NCTC8535_03565 | Not Available | Positive | 3706423 - 3706770 | 12759.3 |
| excinuclease abc subunit a | NCTC8535_03566 | Not Available | Negative | 3706871 - 3709702 | 103676.0 |
| helix-destabilizing protein | NCTC8535_03567 | Not Available | Positive | 3710126 - 3710665 | 19156.4 |
| uncharacterised protein | NCTC8535_03568 | Not Available | Positive | 3710769 - 3711098 | 12080.5 |
| (s)-limonene 6-monooxygenase | NCTC8535_03569 | Not Available | Negative | 3711180 - 3712958 | 66440.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


