Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna protecting protein dpra | NCTC8535_03540 | Not Available | Positive | 3677516 - 3678625 | 40026.2 |
| uncharacterized protein conserved in bacteria | NCTC8535_03541 | Not Available | Positive | 3678597 - 3679070 | 18358.1 |
| dna topoisomerase 1 | NCTC8535_03542 | Not Available | Positive | 3679170 - 3679643 | 17463.3 |
| t(6)a37 threonylcarbamoyladenosine biosynthesis protein rimn | NCTC8535_03543 | Not Available | Positive | 3679650 - 3680219 | 20860.8 |
| shikimate dehydrogenase | NCTC8535_03544 | Not Available | Positive | 3680225 - 3681043 | 29365.2 |
| protein of uncharacterised function (duf1488) | NCTC8535_03545 | Not Available | Positive | 3681040 - 3681300 | 10152.9 |
| carnitine operon protein caie | NCTC8535_03546 | Not Available | Negative | 3681264 - 3681878 | 22075.6 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3682368 - 3683898 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 3684043 - 3684118 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3684383 - 3687289 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


