Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase 1 | NCTC8535_03448 | Not Available | Positive | 3602236 - 3602754 | 19505.1 |
| 3-dehydroquinate synthase | NCTC8535_03449 | Not Available | Positive | 3602919 - 3604004 | 39029.6 |
| uncharacterized protein conserved in bacteria | NCTC8535_03450 | Not Available | Positive | 3604089 - 3605198 | 38146.3 |
| dna adenine methylase | NCTC8535_03451 | Not Available | Positive | 3605345 - 3606157 | 31087.9 |
| ribulose-phosphate 3-epimerase | NCTC8535_03452 | Not Available | Positive | 3606197 - 3606874 | 24216.4 |
| phosphoglycolate phosphatase | NCTC8535_03453 | Not Available | Positive | 3606867 - 3607583 | 25593.7 |
| tryptophan--trna ligase | NCTC8535_03454 | Not Available | Positive | 3607603 - 3608607 | 37514.0 |
| uncharacterised protein | NCTC8535_03455 | Not Available | Negative | 3608868 - 3609041 | 6157.57 |
| siroheme synthase | NCTC8535_03456 | Not Available | Negative | 3609449 - 3610831 | 50499.0 |
| probable nitrite transporter | NCTC8535_03457 | Not Available | Negative | 3610905 - 3611708 | 28607.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


