Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail length tape measure protein | NCTC8535_04569 | Not Available | Negative | 4789092 - 4789505 | 13064.6 |
| uncharacterised protein | NCTC8535_04570 | Not Available | Negative | 4789526 - 4789660 | 4987.88 |
| Tape measure protein | NCTC8535_04571 | Not Available | Negative | 4789660 - 4789989 | 12074.0 |
| uncharacterised protein | NCTC8535_00001 | Not Available | Positive | 236 - 379 | 5296.56 |
| uncharacterised protein | NCTC8535_00018 | Not Available | Positive | 14288 - 15034 | 26622.8 |
| fucose 4-o-acetylase and related acetyltransferases | NCTC8535_00019 | Not Available | Negative | 15073 - 16044 | 37469.1 |
| dna polymerase v subunit umud | NCTC8535_00020 | Not Available | Positive | 16310 - 16687 | 13729.6 |
| phosphoethanolamine transferase epta | NCTC8535_00021 | Not Available | Negative | 16825 - 18360 | 58588.9 |
| d-alanyl-d-alanine carboxypeptidase | NCTC8535_00022 | Not Available | Negative | 18669 - 19358 | 25956.5 |
| succinyl-diaminopimelate desuccinylase | NCTC8535_00023 | Not Available | Negative | 19355 - 20485 | 41384.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


