Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| distal rod protein | NCTC8535_03216 | Not Available | Positive | 3345559 - 3346344 | 27521.6 |
| basal body l-ring protein | NCTC8535_03217 | Not Available | Positive | 3346398 - 3347045 | 23234.5 |
| basal body p-ring protein | NCTC8535_03218 | Not Available | Positive | 3347063 - 3348157 | 37782.3 |
| peptidoglycan hydrolase flgj | NCTC8535_03219 | Not Available | Positive | 3348169 - 3348591 | 15440.3 |
| flagellar hook-associated protein 1 | NCTC8535_03220 | Not Available | Positive | 3348588 - 3349958 | 48563.8 |
| hook-filament junction protein | NCTC8535_03221 | Not Available | Positive | 3349977 - 3350894 | 33379.0 |
| uncharacterised protein | NCTC8535_03222 | Not Available | Positive | 3350900 - 3351928 | 37336.9 |
| uncharacterised protein | NCTC8535_03223 | Not Available | Negative | 3352089 - 3352556 | 17699.9 |
| transcriptional activator cadc | NCTC8535_03224 | Not Available | Negative | 3352528 - 3353493 | 36782.5 |
| flagellin | NCTC8535_03225 | Not Available | Positive | 3354304 - 3355158 | 29239.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


