Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-ribose pyranase | NCTC8535_03134 | Not Available | Positive | 3258680 - 3259099 | 15131.3 |
| ribose import atp-binding protein rbsa | NCTC8535_03135 | Not Available | Positive | 3259107 - 3260612 | 55341.4 |
| ribose transport system permease protein rbsc | NCTC8535_03136 | Not Available | Positive | 3260619 - 3261599 | 33939.6 |
| d-ribose-binding periplasmic protein precursor | NCTC8535_03137 | Not Available | Positive | 3261624 - 3262511 | 30877.3 |
| ribokinase | NCTC8535_03138 | Not Available | Positive | 3262585 - 3263508 | 32420.6 |
| ribose operon repressor | NCTC8535_03139 | Not Available | Positive | 3263536 - 3264537 | 36912.5 |
| high-copy suppressor of rspa | NCTC8535_03140 | Not Available | Negative | 3264512 - 3265903 | 50449.6 |
| pyruvate dehydrogenase complex repressor | NCTC8535_03141 | Not Available | Negative | 3265963 - 3266655 | 26210.6 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3267188 - 3268718 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 3268862 - 3268937 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


