Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase b | NCTC8535_03054 | Not Available | Negative | 3171228 - 3172958 | 64478.3 |
| guanylate kinase | NCTC8535_03055 | Not Available | Positive | 3173231 - 3173854 | 23513.1 |
| dna-directed rna polymerase subunit omega | NCTC8535_03056 | Not Available | Positive | 3173909 - 3174184 | 10287.2 |
| bifunctional (p)ppgpp synthase/hydrolase spot | NCTC8535_03057 | Not Available | Positive | 3174204 - 3176303 | 79147.0 |
| trna (guanosine(18)-2'-o)-methyltransferase | NCTC8535_03058 | Not Available | Positive | 3176341 - 3177000 | 24126.9 |
| atp-dependent dna helicase recg | NCTC8535_03059 | Not Available | Positive | 3177003 - 3179084 | 76522.2 |
| glutamate permease | NCTC8535_03060 | Not Available | Negative | 3179206 - 3180420 | 42851.1 |
| xanthine permease xanp | NCTC8535_03061 | Not Available | Positive | 3180654 - 3182063 | 49572.1 |
| uncharacterized protein involved in outer membrane biogenesis | NCTC8535_03062 | Not Available | Positive | 3182199 - 3183875 | 60784.5 |
| uncharacterised protein | NCTC8535_03063 | Not Available | Negative | 3183916 - 3184491 | 19759.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


