Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide core biosynthesis protein rfag | NCTC8535_03033 | Not Available | Negative | 3155459 - 3156583 | 42495.5 |
| lipopolysaccharide core heptosyltransferase rfaq | NCTC8535_03034 | Not Available | Negative | 3156583 - 3157602 | 38338.2 |
| uncharacterised protein | NCTC8535_03036 | Not Available | Negative | 3157940 - 3158083 | 5557.86 |
| 3-deoxy-d-manno-octulosonic-acid transferase | NCTC8535_03037 | Not Available | Positive | 3158161 - 3159372 | 44848.7 |
| phosphopantetheine adenylyltransferase | NCTC8535_03038 | Not Available | Positive | 3159384 - 3159863 | 17718.6 |
| formamidopyrimidine-dna glycosylase | NCTC8535_03039 | Not Available | Negative | 3159867 - 3160676 | 30119.4 |
| 50s ribosomal protein l33 | NCTC8535_03040 | Not Available | Negative | 3160792 - 3160959 | 6371.94 |
| 50s ribosomal protein l28 | NCTC8535_03041 | Not Available | Negative | 3160971 - 3161207 | 8979.04 |
| dna repair protein radc | NCTC8535_03042 | Not Available | Negative | 3161445 - 3162131 | 25602.0 |
| dna/pantothenate metabolism flavoprotein | NCTC8535_03043 | Not Available | Positive | 3162315 - 3163529 | 43520.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


