Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-3-ketobutyrate coenzyme a ligase | NCTC8535_03023 | Not Available | Negative | 3145188 - 3146384 | 43359.9 |
| adp-l-glycero-d-manno-heptose-6-epimerase | NCTC8535_03024 | Not Available | Positive | 3146694 - 3147623 | 34602.6 |
| adp-heptose--lps heptosyltransferase 2 | NCTC8535_03025 | Not Available | Positive | 3147659 - 3148708 | 38669.9 |
| lipopolysaccharide heptosyltransferase 1 | NCTC8535_03026 | Not Available | Positive | 3148708 - 3149667 | 35916.9 |
| o-antigen ligase rfal | NCTC8535_03027 | Not Available | Positive | 3149696 - 3150922 | 46383.7 |
| lipopolysaccharide core biosynthesis protein | NCTC8535_03028 | Not Available | Negative | 3150949 - 3152034 | 41814.5 |
| lipopolysaccharide core biosynthesis protein | NCTC8535_03029 | Not Available | Negative | 3152080 - 3152859 | 30016.5 |
| lipopolysaccharide core heptose(ii) kinase rfay | NCTC8535_03030 | Not Available | Negative | 3152869 - 3153594 | 28429.5 |
| lipopolysaccharide 1,2-glucosyltransferase | NCTC8535_03031 | Not Available | Negative | 3153623 - 3154630 | 38947.3 |
| lipopolysaccharide core heptose(i) kinase rfap | NCTC8535_03032 | Not Available | Negative | 3154669 - 3155466 | 31083.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


