Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-threonine dehydratase biosynthetic ilva | NCTC8535_02952 | Not Available | Negative | 3067640 - 3069199 | 56676.9 |
| dihydroxy-acid dehydratase | NCTC8535_02953 | Not Available | Negative | 3069202 - 3071052 | 65847.9 |
| branched-chain-amino-acid aminotransferase | NCTC8535_02954 | Not Available | Negative | 3071224 - 3072156 | 34037.5 |
| acetolactate synthase isozyme 2 small subunit | NCTC8535_02955 | Not Available | Negative | 3072229 - 3072504 | 10223.6 |
| acetolactate synthase isozyme 2 large subunit | NCTC8535_02956 | Not Available | Negative | 3072501 - 3074147 | 58354.0 |
| sialic acid permease | NCTC8535_02957 | Not Available | Negative | 3074520 - 3075749 | 44345.4 |
| competence protein comm | NCTC8535_02958 | Not Available | Positive | 3075836 - 3077614 | 64475.6 |
| uncharacterized protein conserved in bacteria | NCTC8535_02959 | Not Available | Negative | 3077641 - 3077979 | 13179.2 |
| hth-type transcriptional regulator abgr | NCTC8535_02960 | Not Available | Positive | 3078102 - 3078935 | 31937.2 |
| Trna-trp | Not Available | Not Available | Positive | 3079107 - 3079182 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


