Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna small subunit methyltransferase e | NCTC8535_02636 | Not Available | Negative | 2724669 - 2725400 | 26846.6 |
| endonuclease-1 precursor | NCTC8535_02637 | Not Available | Negative | 2725523 - 2726233 | 27185.3 |
| sprt-like family | NCTC8535_02638 | Not Available | Negative | 2726363 - 2726839 | 18317.1 |
| arginine/agmatine antiporter | NCTC8535_02639 | Not Available | Positive | 2727390 - 2728718 | 46426.6 |
| lysine decarboxylase, inducible | NCTC8535_02640 | Not Available | Positive | 2728824 - 2731043 | 83193.7 |
| bifunctional glutathionylspermidine synthetase/amidase | NCTC8535_02642 | Not Available | Negative | 2731630 - 2732790 | 44768.0 |
| protein of uncharacterised function (duf1190) | NCTC8535_02643 | Not Available | Negative | 2732793 - 2733476 | 23827.1 |
| glycerol dehydrogenase | NCTC8535_02644 | Not Available | Positive | 2733982 - 2735082 | 39234.3 |
| pts-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhak | NCTC8535_02645 | Not Available | Positive | 2735182 - 2736252 | 38422.1 |
| pts-dependent dihydroxyacetone kinase, adp-binding subunit dhal | NCTC8535_02646 | Not Available | Positive | 2736254 - 2736883 | 22649.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


