Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ditp/xtp pyrophosphatase | NCTC8535_02626 | Not Available | Negative | 2718610 - 2719203 | 20830.9 |
| uncharacterised acr, yggu family cog1872 | NCTC8535_02627 | Not Available | Negative | 2719257 - 2719568 | 11356.8 |
| yggt family | NCTC8535_02628 | Not Available | Negative | 2719565 - 2720119 | 21024.0 |
| predicted enzyme with a tim-barrel fold | NCTC8535_02629 | Not Available | Negative | 2720193 - 2720906 | 25903.9 |
| type ii secretory pathway, atpase pule/tfp pilus assembly pathway, atpase pilb | NCTC8535_02630 | Not Available | Positive | 2720929 - 2721945 | 36952.6 |
| antitoxin yefm | NCTC8535_02631 | Not Available | Positive | 2721929 - 2722261 | 12147.7 |
| toxin yoeb | NCTC8535_02632 | Not Available | Positive | 2722254 - 2722508 | 10506.5 |
| putative holliday junction resolvase | NCTC8535_02633 | Not Available | Negative | 2722514 - 2722936 | 15151.0 |
| uncharacterized acr, cog1678 | NCTC8535_02634 | Not Available | Negative | 2722936 - 2723499 | 20740.1 |
| glutathione synthetase | NCTC8535_02635 | Not Available | Negative | 2723706 - 2724659 | 35548.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


