Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ciii-like protein | NCTC8535_04407 | Not Available | Negative | 4671853 - 4672014 | 5958.16 |
| Hypothetical protein | NCTC8535_04408 | Not Available | Negative | 4672045 - 4673070 | 38808.9 |
| Hypothetical protein | NCTC8535_04409 | Not Available | Negative | 4673253 - 4673885 | 23617.5 |
| uncharacterised protein | NCTC8535_04410 | Not Available | Negative | 4673918 - 4674067 | 5593.84 |
| Hypothetical protein | NCTC8535_04411 | Not Available | Positive | 4674246 - 4674656 | 15056.9 |
| Hnh endonuclease | NCTC8535_04412 | Not Available | Negative | 4674729 - 4675277 | 21089.2 |
| Ci repressor | NCTC8535_04413 | Not Available | Negative | 4675766 - 4676518 | 27948.0 |
| Regulatory protein cro | NCTC8535_04414 | Not Available | Positive | 4676639 - 4676872 | 8573.16 |
| Cii protein | NCTC8535_04415 | Not Available | Positive | 4676990 - 4677289 | 10785.0 |
| Hypothetical protein | NCTC8535_04416 | Not Available | Positive | 4677316 - 4677723 | 15496.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


