Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit psi | NCTC8535_02403 | Not Available | Negative | 2509057 - 2509467 | 15130.2 |
| ribosomal rna small subunit methyltransferase c | NCTC8535_02404 | Not Available | Positive | 2509653 - 2510693 | 37993.5 |
| Trna-leu | Not Available | Not Available | Positive | 2510929 - 2511015 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2511050 - 2511136 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2511194 - 2511280 | Not Available |
| protein of uncharacterised function (duf1435) | NCTC8535_02408 | Not Available | Negative | 2511386 - 2511688 | 10932.3 |
| diguanylate cyclase dosc | NCTC8535_02409 | Not Available | Positive | 2511981 - 2513045 | 40433.3 |
| ferric iron reductase protein fhuf | NCTC8535_02410 | Not Available | Positive | 2513359 - 2514153 | 30236.6 |
| inner membrane protein yhai | NCTC8535_02411 | Not Available | Positive | 2514287 - 2514661 | 13796.3 |
| ferric hydroxamate uptake | NCTC8535_02412 | Not Available | Positive | 2514998 - 2517172 | 80880.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


