Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine--trna ligase, heat inducible | NCTC8535_02321 | Not Available | Negative | 2418844 - 2420361 | 58127.4 |
| peptide chain release factor 2 | NCTC8535_02322 | Not Available | Negative | 2420371 - 2421252 | 32919.4 |
| single-stranded-dna-specific exonuclease recj | NCTC8535_02323 | Not Available | Negative | 2421876 - 2423573 | 62005.6 |
| thiol:disulfide interchange protein dsbc precursor | NCTC8535_02324 | Not Available | Negative | 2423615 - 2424331 | 25733.3 |
| tyrosine recombinase xerd | NCTC8535_02325 | Not Available | Negative | 2424359 - 2425270 | 34814.7 |
| flavodoxin | NCTC8535_02326 | Not Available | Positive | 2425463 - 2425981 | 19686.6 |
| protein of uncharacterised function (duf1434) | NCTC8535_02327 | Not Available | Negative | 2426052 - 2426465 | 16288.9 |
| flavinator of succinate dehydrogenase | NCTC8535_02328 | Not Available | Negative | 2426446 - 2426712 | 10346.4 |
| pp_02215 | NCTC8535_02329 | Not Available | Positive | 2427090 - 2428079 | Not Available |
| shikimate 5-dehydrogenase-like protein hi_0607 | NCTC8535_02330 | Not Available | Negative | 2428232 - 2429050 | 29495.4 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


