Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase isoenzymes formation protein hype | NCTC8535_02301 | Not Available | Positive | 2393093 - 2394121 | 36234.8 |
| formate hydrogenlyase regulatory protein hyca | NCTC8535_02302 | Not Available | Negative | 2394452 - 2394916 | 17737.0 |
| formate hydrogenlyase transcriptional activator | NCTC8535_02303 | Not Available | Negative | 2395228 - 2397342 | 79633.4 |
| diaminopimelate decarboxylase | NCTC8535_02304 | Not Available | Negative | 2397604 - 2398866 | 46329.4 |
| cyn operon transcriptional activator | NCTC8535_02305 | Not Available | Positive | 2399015 - 2399959 | 35162.5 |
| uncharacterised protein | NCTC8535_02306 | Not Available | Positive | 2400055 - 2400246 | 7364.58 |
| uncharacterised protein | NCTC8535_02307 | Not Available | Negative | 2400319 - 2400540 | 7271.94 |
| minor endoglucanase y precursor | NCTC8535_02308 | Not Available | Negative | 2400816 - 2401832 | 38947.6 |
| cellulose synthase operon protein d | NCTC8535_02309 | Not Available | Negative | 2401832 - 2402314 | 18010.1 |
| cellulose synthase operon protein c precursor | NCTC8535_02310 | Not Available | Negative | 2402319 - 2406293 | 144174.0 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


