Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase maturation protein hych | NCTC8535_02290 | Not Available | Positive | 2380776 - 2381231 | 17433.9 |
| hydrogenase 3 maturation protease | NCTC8535_02291 | Not Available | Positive | 2381224 - 2381751 | 19220.9 |
| formate dehydrogenase h | NCTC8535_02293 | Not Available | Positive | 2382545 - 2384221 | 62590.4 |
| electron transport protein hydn | NCTC8535_02294 | Not Available | Positive | 2384667 - 2385212 | 19969.3 |
| formate dehydrogenase h | NCTC8535_02295 | Not Available | Positive | 2385353 - 2387581 | 82462.3 |
| carbamoyltransferase hypf | NCTC8535_02296 | Not Available | Positive | 2387747 - 2390047 | 84161.7 |
| hydrogenase nickel incorporation protein hybf | NCTC8535_02297 | Not Available | Positive | 2390157 - 2390498 | 12458.7 |
| hydrogenase isoenzymes nickel incorporation protein hypb | NCTC8535_02298 | Not Available | Positive | 2390516 - 2391661 | 43254.1 |
| hydrogenase isoenzymes formation protein hypc | NCTC8535_02299 | Not Available | Positive | 2391652 - 2391948 | 10604.9 |
| hydrogenase isoenzymes formation protein hypd | NCTC8535_02300 | Not Available | Positive | 2391962 - 2393077 | 40986.5 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


