Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein (competence- and mitomycin-induced) | NCTC8535_02257 | Not Available | Negative | 2341908 - 2342396 | 17011.4 |
| membrane-bound lytic murein transglycosylase b precursor | NCTC8535_02258 | Not Available | Negative | 2342674 - 2343774 | 40579.0 |
| dna-binding transcriptional activator cadc | NCTC8535_02259 | Not Available | Positive | 2344210 - 2345136 | 35094.9 |
| outer membrane protein icsa autotransporter precursor | NCTC8535_02260 | Not Available | Positive | 2345463 - 2348867 | 120711.0 |
| dna mismatch repair protein muts | NCTC8535_02261 | Not Available | Positive | 2349039 - 2351690 | 98537.8 |
| rna polymerase sigma factor rpos | NCTC8535_02262 | Not Available | Negative | 2351765 - 2352751 | 37732.8 |
| murein hydrolase activator nlpd precursor | NCTC8535_02263 | Not Available | Negative | 2352804 - 2353793 | 34407.1 |
| 5'/3'-nucleotidase sure | NCTC8535_02265 | Not Available | Negative | 2354816 - 2355577 | 27137.3 |
| trna pseudouridine synthase d | NCTC8535_02266 | Not Available | Negative | 2355558 - 2356604 | 39254.3 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | NCTC8535_02267 | Not Available | Negative | 2356608 - 2357081 | 16846.4 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


