Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase d | NCTC8535_02225 | Not Available | Negative | 2316164 - 2317144 | 36924.6 |
| outer membrane biogenesis protein bamd | NCTC8535_02226 | Not Available | Positive | 2317276 - 2318013 | 27632.8 |
| spoty | NCTC8535_02227 | Not Available | Positive | 2318339 - 2318692 | 13242.8 |
| p-protein | NCTC8535_02229 | Not Available | Positive | 2318996 - 2320147 | 42597.9 |
| t-protein | NCTC8535_02230 | Not Available | Negative | 2320210 - 2321331 | 42111.2 |
| phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive | NCTC8535_02231 | Not Available | Negative | 2321337 - 2322419 | 39394.0 |
| probable transcriptional regulatory protein yeht | NCTC8535_02232 | Not Available | Positive | 2322668 - 2323384 | 27169.1 |
| lipoprotein | NCTC8535_02233 | Not Available | Positive | 2323451 - 2323804 | 12952.2 |
| anaerobic c4-dicarboxylate transporter dcub | NCTC8535_02234 | Not Available | Positive | 2323984 - 2325327 | 48287.8 |
| putative salt-induced outer membrane protein | NCTC8535_02235 | Not Available | Positive | 2325520 - 2326284 | 27615.6 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


