Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane abc transporter permease protein ydcu | NCTC8535_02205 | Not Available | Negative | 2295030 - 2295974 | 34972.8 |
| spermidine/putrescine import atp-binding protein pota | NCTC8535_02206 | Not Available | Negative | 2295976 - 2297001 | 37806.6 |
| uncharacterised protein | NCTC8535_02207 | Not Available | Positive | 2297006 - 2297119 | 4004.66 |
| putrescine-binding periplasmic protein precursor | NCTC8535_02208 | Not Available | Negative | 2297179 - 2298342 | 42615.7 |
| gamma-aminobutyraldehyde dehydrogenase | NCTC8535_02209 | Not Available | Negative | 2298425 - 2299882 | 52739.9 |
| hth-type transcriptional regulator gltc | NCTC8535_02210 | Not Available | Negative | 2300056 - 2300961 | 33551.9 |
| Trna-asp | Not Available | Not Available | Positive | 2301171 - 2301247 | Not Available |
| dna polymerase iii subunit epsilon | NCTC8535_02212 | Not Available | Negative | 2301382 - 2302134 | 28289.8 |
| ribonuclease hi | NCTC8535_02213 | Not Available | Positive | 2302188 - 2302658 | 17759.1 |
| methyltransferase domain | NCTC8535_02214 | Not Available | Negative | 2302679 - 2303401 | 27187.3 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


