Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal-phosphate-dependent serine hydroxymethyltransferase | NCTC8535_02195 | Not Available | Negative | 2278764 - 2280017 | 45340.1 |
| nitric oxide dioxygenase | NCTC8535_02196 | Not Available | Positive | 2280388 - 2281578 | 44755.2 |
| putative aldose-1-epimerase | NCTC8535_02197 | Not Available | Negative | 2282119 - 2282976 | 31804.0 |
| d-xylose transporter | NCTC8535_02198 | Not Available | Negative | 2282973 - 2284403 | 51324.9 |
| predicted methyltransferase (contains tpr repeat) | NCTC8535_02199 | Not Available | Negative | 2284485 - 2287754 | 123136.0 |
| n-acetylmannosamine kinase | NCTC8535_02200 | Not Available | Positive | 2287871 - 2289070 | 44738.8 |
| alcohol dehydrogenase cytochrome c subunit precursor | NCTC8535_02201 | Not Available | Negative | 2289152 - 2290336 | 42730.7 |
| protoporphyrinogen oxidase | NCTC8535_02202 | Not Available | Negative | 2290333 - 2292243 | 70732.0 |
| gamma-aminobutyraldehyde dehydrogenase | NCTC8535_02203 | Not Available | Negative | 2292469 - 2293896 | 51279.5 |
| inner membrane abc transporter permease protein ydcv | NCTC8535_02204 | Not Available | Negative | 2294228 - 2295040 | 29363.3 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


