Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hsc20 | NCTC8535_02185 | Not Available | Negative | 2270409 - 2270927 | 20103.1 |
| iron-sulfur cluster assembly protein | NCTC8535_02186 | Not Available | Negative | 2271123 - 2271446 | 11558.6 |
| nifu-like protein | NCTC8535_02187 | Not Available | Negative | 2271547 - 2271933 | 13698.2 |
| cysteine desulfurase | NCTC8535_02188 | Not Available | Negative | 2271964 - 2273178 | 44854.9 |
| hth-type transcriptional regulator iscr | NCTC8535_02189 | Not Available | Negative | 2273250 - 2273747 | 17844.1 |
| trna (cytidine/uridine-2'-o-)-methyltransferase trmj | NCTC8535_02190 | Not Available | Negative | 2273980 - 2274711 | 26820.3 |
| inositol-1-monophosphatase | NCTC8535_02191 | Not Available | Positive | 2274964 - 2275767 | 29247.0 |
| nickel/cobalt efflux protein rcna | NCTC8535_02192 | Not Available | Negative | 2275833 - 2276855 | 36806.9 |
| abc-type uncharacterized transport system, periplasmic component | NCTC8535_02193 | Not Available | Negative | 2276846 - 2277511 | 25049.9 |
| stationary phase inducible protein csie | NCTC8535_02194 | Not Available | Positive | 2277691 - 2278701 | 38893.1 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


