Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | NCTC8535_03702 | Not Available | Negative | 3871998 - 3872642 | 24704.9 |
| Gp11 | NCTC8535_03703 | Not Available | Negative | 3872639 - 3873076 | 15823.8 |
| Hypothetical protein | NCTC8535_03704 | Not Available | Positive | 3873389 - 3873694 | 10759.0 |
| Gp41 | NCTC8535_03705 | Not Available | Positive | 3873705 - 3874640 | 35388.0 |
| Integrase core domain protein | NCTC8535_03706 | Not Available | Positive | 3874641 - 3876245 | 60240.8 |
| Putative transposase b subunit | NCTC8535_03707 | Not Available | Positive | 3876411 - 3877313 | 34467.2 |
| Gp32, dna-binding protein rdgb | NCTC8535_03708 | Not Available | Positive | 3877395 - 3877742 | 13176.8 |
| Glutathionylspermidine synthase | NCTC8535_03709 | Not Available | Positive | 3878160 - 3880037 | 71199.1 |
| Attr | Not Available | Not Available | Positive | 3889932 - 3889943 | Not Available |
| Serine protease | NCTC8535_04387 | Not Available | Positive | 4660542 - 4663352 | 100422.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


