Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein b25.3 | NCTC8535_02084 | Not Available | Negative | 2158518 - 2159105 | 22086.1 |
| probable inorganic polyphosphate/atp-nad kinase | NCTC8535_02085 | Not Available | Positive | 2159229 - 2160107 | 32505.1 |
| recombination protein n | NCTC8535_02086 | Not Available | Positive | 2160205 - 2161866 | 61684.1 |
| small protein a precursor | NCTC8535_02087 | Not Available | Positive | 2161979 - 2162329 | 12795.3 |
| uncharacterised protein family (upf0125) | NCTC8535_02088 | Not Available | Negative | 2162389 - 2162673 | 10871.3 |
| ribosome association toxin rata | NCTC8535_02089 | Not Available | Negative | 2162666 - 2163100 | 15665.9 |
| small protein b | NCTC8535_02090 | Not Available | Positive | 2163258 - 2163740 | 18276.1 |
| Tmrna,resume consensus sequence (at 84): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 2163790 - 2164153 | Not Available |
| diguanylate cyclase dosc | NCTC8535_02092 | Not Available | Negative | 2164470 - 2165978 | 57880.5 |
| inner membrane protein ybjj | NCTC8535_02093 | Not Available | Positive | 2166433 - 2167623 | 41147.0 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


