Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor 4 | NCTC8535_02074 | Not Available | Negative | 2147838 - 2149631 | 66384.0 |
| sigma-e factor regulatory protein rsec | NCTC8535_02075 | Not Available | Negative | 2149764 - 2150228 | 16408.0 |
| sigma-e factor regulatory protein rseb precursor | NCTC8535_02076 | Not Available | Negative | 2150225 - 2151187 | 35804.7 |
| sigma-e factor negative regulatory protein | NCTC8535_02077 | Not Available | Negative | 2151187 - 2151831 | 23433.4 |
| sigma-24 | NCTC8535_02078 | Not Available | Negative | 2151861 - 2152436 | 21658.9 |
| l-aspartate oxidase | NCTC8535_02079 | Not Available | Positive | 2152615 - 2154252 | 61303.1 |
| trna1(val) (adenine(37)-n6)-methyltransferase | NCTC8535_02080 | Not Available | Negative | 2154462 - 2155211 | 27712.9 |
| atp-dependent rna helicase srmb | NCTC8535_02081 | Not Available | Positive | 2155361 - 2156689 | 50256.6 |
| autonomous glycyl radical cofactor | NCTC8535_02082 | Not Available | Negative | 2156995 - 2157378 | 14390.2 |
| uracil-dna glycosylase | NCTC8535_02083 | Not Available | Positive | 2157760 - 2158455 | 25914.8 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


