Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative cyclic di-gmp phosphodiesterase ylie | NCTC8535_02063 | Not Available | Negative | 2132410 - 2134992 | 96633.2 |
| diguanylate cyclase dosc | NCTC8535_02064 | Not Available | Negative | 2135005 - 2135970 | 37188.8 |
| gtp pyrophosphokinase | NCTC8535_02065 | Not Available | Negative | 2136383 - 2138626 | 84862.8 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | NCTC8535_02066 | Not Available | Negative | 2138661 - 2139977 | 48616.9 |
| signal transduction histidine-protein kinase bara | NCTC8535_02067 | Not Available | Positive | 2140054 - 2142795 | 102840.0 |
| holo-[acyl-carrier-protein] synthase | NCTC8535_02068 | Not Available | Negative | 2142867 - 2143247 | 13819.7 |
| pyridoxine 5'-phosphate synthase | NCTC8535_02069 | Not Available | Negative | 2143247 - 2143978 | 26808.4 |
| recombination protein o | NCTC8535_02070 | Not Available | Negative | 2144110 - 2144838 | 27040.8 |
| gtp-binding protein era | NCTC8535_02071 | Not Available | Negative | 2144851 - 2145756 | 33992.2 |
| signal peptidase i | NCTC8535_02073 | Not Available | Negative | 2146742 - 2147716 | 36234.8 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


