Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate-coa oxygenase, paaj subunit | NCTC8535_02053 | Not Available | Positive | 2122841 - 2123350 | 18747.6 |
| 3-ketosteroid-9-alpha-hydroxylase reductase subunit | NCTC8535_02054 | Not Available | Positive | 2123365 - 2124423 | 38813.6 |
| probable enoyl-coa hydratase echa8 | NCTC8535_02055 | Not Available | Positive | 2124433 - 2125206 | 27684.1 |
| 4-chlorobenzoyl coenzyme a dehalogenase-1 | NCTC8535_02056 | Not Available | Positive | 2125211 - 2126011 | 29013.9 |
| probable 3-hydroxybutyryl-coa dehydrogenase | NCTC8535_02057 | Not Available | Positive | 2126014 - 2127558 | 55443.8 |
| acyl-coenzyme a thioesterase paai | NCTC8535_02058 | Not Available | Positive | 2127558 - 2128007 | 15981.8 |
| beta-ketoadipyl-coa thiolase | NCTC8535_02059 | Not Available | Positive | 2128004 - 2129209 | 42069.9 |
| phenylacetate-coenzyme a ligase | NCTC8535_02060 | Not Available | Positive | 2129291 - 2130595 | 48645.5 |
| phenylacetic acid degradation operon negative regulatory protein paax | NCTC8535_02061 | Not Available | Positive | 2130723 - 2131664 | 36246.4 |
| carnitine operon protein caie | NCTC8535_02062 | Not Available | Positive | 2131677 - 2132273 | 21614.1 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


