Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose operon transcriptional activator rhar | NCTC8535_01937 | Not Available | Negative | 2000528 - 2001388 | 33241.8 |
| l-rhamnose operon regulatory protein rhas | NCTC8535_01938 | Not Available | Negative | 2001526 - 2002347 | 31521.2 |
| rhamnulokinase | NCTC8535_01939 | Not Available | Positive | 2002686 - 2004164 | 54540.5 |
| l-rhamnose isomerase | NCTC8535_01940 | Not Available | Positive | 2004161 - 2005417 | 47087.9 |
| rhamnulose-1-phosphate aldolase | NCTC8535_01941 | Not Available | Positive | 2005443 - 2006267 | 29985.1 |
| alcohol dehydrogenase 2 | NCTC8535_01942 | Not Available | Positive | 2006346 - 2007494 | 40500.9 |
| l-rhamnose mutarotase | NCTC8535_01943 | Not Available | Positive | 2007504 - 2007818 | 12327.5 |
| endo-type membrane-bound lytic murein transglycosylase a precursor | NCTC8535_01944 | Not Available | Positive | 2008007 - 2008612 | 22477.6 |
| inner membrane abc transporter permease protein yjff | NCTC8535_01945 | Not Available | Negative | 2008784 - 2009791 | 35573.7 |
| inner membrane abc transporter permease protein ytft | NCTC8535_01946 | Not Available | Negative | 2009784 - 2010803 | 35254.7 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


