Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine 5'-phosphate oxidase, fmn-binding family | NCTC8535_01887 | Not Available | Positive | 1952071 - 1952658 | 21466.7 |
| glutamate/aspartate periplasmic-binding protein precursor | NCTC8535_01888 | Not Available | Positive | 1953070 - 1954002 | 34266.1 |
| glutamate/aspartate transport system permease protein gltk | NCTC8535_01889 | Not Available | Positive | 1954262 - 1955002 | 27445.1 |
| glutamate/aspartate transport system permease protein gltk | NCTC8535_01890 | Not Available | Positive | 1955002 - 1955676 | 24986.3 |
| arginine transport atp-binding protein artm | NCTC8535_01891 | Not Available | Positive | 1955676 - 1956401 | 26655.6 |
| pyrimidine-specific ribonucleoside hydrolase riha | NCTC8535_01892 | Not Available | Positive | 1956610 - 1957557 | 34225.5 |
| pyrimidine-specific ribonucleoside hydrolase riha | NCTC8535_01893 | Not Available | Positive | 1957572 - 1958504 | 33301.8 |
| protein of uncharacterised function (duf1451) | NCTC8535_01894 | Not Available | Negative | 1958556 - 1959038 | 18815.2 |
| leucine--trna ligase | NCTC8535_01895 | Not Available | Positive | 1959392 - 1961974 | 97393.0 |
| rare lipoprotein b | NCTC8535_01896 | Not Available | Positive | 1961989 - 1962726 | 26455.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


