Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase flavoprotein precursor | NCTC8535_01603 | Not Available | Negative | 1652798 - 1654582 | 65542.3 |
| gluconate 2-dehydrogenase subunit 3 precursor | NCTC8535_01604 | Not Available | Negative | 1654586 - 1655335 | 27484.5 |
| threonine efflux protein | NCTC8535_01605 | Not Available | Negative | 1655759 - 1656397 | 23155.6 |
| internalin-a precursor | NCTC8535_01606 | Not Available | Positive | 1656622 - 1657515 | 33806.5 |
| predicted metal-dependent rnase, consists of a metallo-beta-lactamase domain and an rna-binding kh domain | NCTC8535_01607 | Not Available | Positive | 1657554 - 1658372 | 30464.6 |
| putative bacilysin exporter bace | NCTC8535_01608 | Not Available | Positive | 1658781 - 1659977 | 43594.2 |
| spermidine n(1)-acetyltransferase | NCTC8535_01609 | Not Available | Negative | 1659987 - 1660538 | 21180.5 |
| ribosomal protein s12 methylthiotransferase rimo | NCTC8535_01610 | Not Available | Positive | 1660693 - 1662009 | 48974.9 |
| nucleotide sugar dehydrogenase | NCTC8535_01611 | Not Available | Negative | 1662212 - 1663039 | 29497.5 |
| atp phosphoribosyltransferase | NCTC8535_01613 | Not Available | Positive | 1663588 - 1664487 | 33536.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


