Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine abc transporter permease protein artq | NCTC8535_01571 | Not Available | Positive | 1619970 - 1620686 | 26322.0 |
| arginine abc transporter permease protein artm | NCTC8535_01572 | Not Available | Positive | 1620686 - 1621354 | 24985.3 |
| abc transporter arginine-binding protein 1 precursor | NCTC8535_01573 | Not Available | Positive | 1621585 - 1622316 | 26854.1 |
| methylated-dna--protein-cysteine methyltransferase, constitutive | NCTC8535_01574 | Not Available | Positive | 1622461 - 1622949 | 18059.8 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | NCTC8535_01575 | Not Available | Negative | 1622937 - 1624070 | 42276.3 |
| inner membrane protein ybjo | NCTC8535_01576 | Not Available | Negative | 1624179 - 1624670 | 18246.8 |
| inner membrane abc transporter permease protein ydcv | NCTC8535_01577 | Not Available | Negative | 1624781 - 1625626 | 30553.6 |
| putrescine transport system permease protein poth | NCTC8535_01578 | Not Available | Negative | 1625626 - 1626588 | 36049.2 |
| spermidine/putrescine import atp-binding protein pota | NCTC8535_01579 | Not Available | Negative | 1626599 - 1627732 | 42070.4 |
| putrescine-binding periplasmic protein precursor | NCTC8535_01580 | Not Available | Negative | 1627886 - 1628992 | 40374.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


