Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate channel 1 | NCTC8535_01531 | Not Available | Positive | 1568933 - 1569790 | 30721.3 |
| formate acetyltransferase 1 | NCTC8535_01532 | Not Available | Positive | 1569852 - 1572134 | 85227.7 |
| pyruvate formate-lyase 1-activating enzyme | NCTC8535_01533 | Not Available | Positive | 1572433 - 1573173 | 28195.7 |
| uncharacterised protein | NCTC8535_01534 | Not Available | Positive | 1573726 - 1574181 | 16921.4 |
| uncharacterized mfs-type transporter ycad | NCTC8535_01535 | Not Available | Negative | 1574257 - 1575396 | 40821.3 |
| uncharacterized fe-s center protein | NCTC8535_01536 | Not Available | Negative | 1575513 - 1576100 | 20763.8 |
| twin-arginine leader-binding protein dmsd | NCTC8535_01537 | Not Available | Negative | 1576100 - 1576714 | 23109.7 |
| dmso reductase anchor subunit | NCTC8535_01538 | Not Available | Negative | 1576828 - 1577688 | 30585.0 |
| dmso reductase iron-sulfur subunit | NCTC8535_01539 | Not Available | Negative | 1577690 - 1578310 | 22921.2 |
| dimethyl sulfoxide reductase dmsa precursor | NCTC8535_01540 | Not Available | Negative | 1578321 - 1580765 | 89761.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


