Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a export atp-binding/permease protein msba | NCTC8535_01521 | Not Available | Negative | 1554278 - 1556026 | 64391.3 |
| comec family competence protein | NCTC8535_01522 | Not Available | Negative | 1556063 - 1558336 | 85020.9 |
| integration host factor subunit beta | NCTC8535_01523 | Not Available | Negative | 1558581 - 1558865 | 10630.8 |
| 30s ribosomal protein s1 | NCTC8535_01524 | Not Available | Negative | 1558951 - 1560627 | 61308.8 |
| cytidylate kinase | NCTC8535_01525 | Not Available | Negative | 1560849 - 1561538 | 25118.1 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | NCTC8535_01526 | Not Available | Negative | 1561883 - 1563163 | 45924.0 |
| phosphoserine aminotransferase | NCTC8535_01527 | Not Available | Negative | 1563317 - 1564405 | 40118.0 |
| protein of uncharacterised function (duf421) | NCTC8535_01528 | Not Available | Negative | 1564680 - 1565372 | 26361.2 |
| l-asparaginase 2 precursor | NCTC8535_01529 | Not Available | Negative | 1565464 - 1566510 | 36778.9 |
| ycao-like family | NCTC8535_01530 | Not Available | Positive | 1566654 - 1568414 | 65893.3 |
Pathways
1336 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


