Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna primase | NCTC8535_02438 | Not Available | Positive | 2543175 - 2544923 | 65674.6 |
| Rna polymerase sigma factor | NCTC8535_02439 | Not Available | Positive | 2545183 - 2547015 | 70153.3 |
| G/u mismatch-specific uracil dna glycosylase | NCTC8535_02440 | Not Available | Negative | 2547084 - 2547581 | 18202.9 |
| Trna-met; | Not Available | Not Available | Positive | 2547721 - 2547796 | Not Available |
| Attl | Not Available | Not Available | Positive | 2547751 - 2547783 | Not Available |
| uncharacterised protein | NCTC8535_02442 | Not Available | Positive | 2547947 - 2548981 | 39367.5 |
| Hypothetical protein | NCTC8535_02443 | Not Available | Negative | 2549512 - 2551188 | 60579.0 |
| Hypothetical protein | NCTC8535_02444 | Not Available | Negative | 2551192 - 2551737 | 19452.1 |
| Hypothetical protein | NCTC8535_02445 | Not Available | Negative | 2551709 - 2552434 | 24898.9 |
| Tail fiber assembly protein | NCTC8535_02446 | Not Available | Negative | 2552424 - 2552948 | 19670.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


