Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized hth-type transcriptional regulator ybbh | NCTC8535_01135 | Not Available | Positive | 1166365 - 1167234 | 31977.6 |
| pyruvate kinase ii | NCTC8535_01136 | Not Available | Positive | 1167545 - 1168987 | 51524.4 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | NCTC8535_01137 | Not Available | Negative | 1169071 - 1170033 | 37255.5 |
| glycyl-glycine endopeptidase lytm precursor | NCTC8535_01138 | Not Available | Negative | 1170199 - 1171524 | 48902.2 |
| high-affinity zinc uptake system protein znua precursor | NCTC8535_01139 | Not Available | Negative | 1171538 - 1172548 | 36901.0 |
| zinc import atp-binding protein znuc | NCTC8535_01140 | Not Available | Positive | 1172622 - 1173407 | 28613.1 |
| high-affinity zinc uptake system membrane protein znub | NCTC8535_01141 | Not Available | Positive | 1173404 - 1174189 | 27889.5 |
| holliday junction atp-dependent dna helicase ruvb | NCTC8535_01142 | Not Available | Negative | 1174272 - 1175276 | 36940.6 |
| holliday junction atp-dependent dna helicase ruva | NCTC8535_01143 | Not Available | Negative | 1175299 - 1175913 | 22417.4 |
| crossover junction endodeoxyribonuclease ruvc | NCTC8535_01144 | Not Available | Negative | 1176015 - 1176536 | 18438.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


