Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-tyr | Not Available | Not Available | Positive | 1109326 - 1109410 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 1109496 - 1109580 | Not Available |
| log family protein yvdd | NCTC8535_01077 | Not Available | Positive | 1109745 - 1110314 | 20914.1 |
| exodeoxyribonuclease iii | NCTC8535_01078 | Not Available | Positive | 1110421 - 1111230 | 30945.7 |
| ctp pyrophosphohydrolase | NCTC8535_01079 | Not Available | Positive | 1111236 - 1111667 | 15828.6 |
| protein of uncharacterised function (duf1496) | NCTC8535_01080 | Not Available | Negative | 1111769 - 1112071 | 10773.0 |
| dna topoisomerase 3 | NCTC8535_01081 | Not Available | Negative | 1112068 - 1113987 | 72292.6 |
| trna 2-selenouridine synthase | NCTC8535_01082 | Not Available | Negative | 1113987 - 1115120 | 43330.0 |
| selenide, water dikinase | NCTC8535_01083 | Not Available | Negative | 1115120 - 1116163 | 36767.3 |
| putative nad(p)h nitroreductase ydja | NCTC8535_01084 | Not Available | Negative | 1116388 - 1116936 | 19918.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


