Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 1044817 - 1044893 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1044914 - 1044990 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1045011 - 1045087 | Not Available |
| pyruvate kinase i | NCTC8535_01017 | Not Available | Positive | 1045645 - 1047057 | 50639.6 |
| murein-lipoprotein | NCTC8535_01018 | Not Available | Positive | 1047360 - 1047596 | 8457.13 |
| probable l,d-transpeptidase ycfs precursor | NCTC8535_01019 | Not Available | Negative | 1047811 - 1048812 | 36123.9 |
| membrane-bound lytic murein transglycosylase f precursor | NCTC8535_01020 | Not Available | Positive | 1049194 - 1050636 | 54069.5 |
| periplasmic murein peptide-binding protein precursor | NCTC8535_01021 | Not Available | Negative | 1050626 - 1052242 | 60004.6 |
| murein peptide amidase a | NCTC8535_01022 | Not Available | Positive | 1052505 - 1053224 | 25668.6 |
| l-ala-d/l-glu epimerase | NCTC8535_01023 | Not Available | Negative | 1053233 - 1054210 | 35386.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


