Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase ynic | NCTC8535_01004 | Not Available | Positive | 1034589 - 1035245 | 24335.3 |
| inner membrane protein ydjm | NCTC8535_01005 | Not Available | Positive | 1035395 - 1035937 | 20204.2 |
| transporter of cystine tcyp | NCTC8535_01006 | Not Available | Positive | 1036184 - 1037575 | 48716.0 |
| pectin degradation repressor protein kdgr | NCTC8535_01007 | Not Available | Negative | 1037659 - 1038447 | 29892.9 |
| spectinomycin tetracycline efflux pump | NCTC8535_01008 | Not Available | Positive | 1038670 - 1040046 | 48122.4 |
| uncharacterised protein | NCTC8535_01009 | Not Available | Negative | 1040154 - 1040483 | 12653.2 |
| yada-like c-terminal region | NCTC8535_01010 | Not Available | Positive | 1040795 - 1041760 | 33623.9 |
| uncharacterised protein | NCTC8535_01011 | Not Available | Positive | 1041846 - 1042262 | 14964.9 |
| riboflavin synthase alpha chain | NCTC8535_01012 | Not Available | Negative | 1042316 - 1042966 | 23567.7 |
| multidrug-efflux transporter | NCTC8535_01013 | Not Available | Positive | 1043267 - 1044637 | 49578.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


