Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia alvei |
| Strain | strain NCTC8535 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hot spring |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1230251 bp
Thymine Count
1228315 bp
Guanine Count
1165036 bp
Cytosine Count
1166554 bp
Genome Length
4790156 bp
Protein-coding Genes
4107 genes
Non-Coding Genes
376 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | NCTC8535_00726 | Not Available | Negative | 739455 - 740045 | 21941.2 |
| uncharacterized oxidoreductase ycik | NCTC8535_00727 | Not Available | Negative | 740100 - 740861 | 27289.0 |
| probable protease sohb | NCTC8535_00728 | Not Available | Positive | 741168 - 742199 | 38640.6 |
| protein of uncharacterised function (duf2498) | NCTC8535_00729 | Not Available | Negative | 742290 - 742541 | 9558.4 |
| dna topoisomerase 1 | NCTC8535_00730 | Not Available | Positive | 742976 - 745573 | 97339.0 |
| cys regulon transcriptional activator | NCTC8535_00731 | Not Available | Positive | 746005 - 746979 | 36074.5 |
| lipid a palmitoyltransferase pagp precursor | NCTC8535_00732 | Not Available | Negative | 747050 - 747655 | 23475.5 |
| laccase domain protein yfih | NCTC8535_00734 | Not Available | Negative | 748850 - 749557 | 26366.7 |
| ribosomal rna large subunit methyltransferase a | NCTC8535_00735 | Not Available | Positive | 749730 - 750542 | 30648.4 |
| putative sporulation protein ytaf | NCTC8535_00736 | Not Available | Negative | 750601 - 751173 | 20494.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Mild diseases | Causes | PMC5615607 |
| Bee septicemia | Causes | PMC8729767 |
| Septicemia | Causes | PMC8729767 |


