Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Grimontia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Grimontia |
| Species | Grimontia hollisae |
| Strain | strain NCTC11645 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1028843 bp
Thymine Count
1023814 bp
Guanine Count
1022860 bp
Cytosine Count
999768 bp
Genome Length
4075285 bp
Protein-coding Genes
3568 genes
Non-Coding Genes
207 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--trna ligase | NCTC11645_00533 | Not Available | Negative | 539691 - 542564 | 108530.0 |
| dna polymerase iii subunit chi | NCTC11645_00534 | Not Available | Negative | 542585 - 543040 | 16867.3 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 544574 - 546113 | Not Available |
| cytosol aminopeptidase | NCTC11645_00535 | Not Available | Negative | 543172 - 544680 | 54612.9 |
| lipopolysaccharide export system permease protein lptf | NCTC11645_00536 | Not Available | Positive | 544874 - 545974 | 40723.5 |
| lipopolysaccharide export system permease protein lptg | NCTC11645_00537 | Not Available | Positive | 545974 - 547047 | 39233.5 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 546897 - 549898 | Not Available |
| transposase domain (duf772) | NCTC11645_00538 | Not Available | Negative | 547182 - 548603 | 54663.9 |
| rdd family | NCTC11645_00539 | Not Available | Negative | 548725 - 549216 | 18051.9 |
| Trna-leu | Not Available | Not Available | Positive | 549399 - 549485 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Severe gastroenteritis | Causes | PMC3897461 |
| Hypovolemic shock | Causes | PMC3897461 |
