Grimontia hollisae strain NCTC11645

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Grimontia

Description

Grimontia hollisae strain NCTC11645 is a Gram-negative bacterium that exhibits facultative anaerobic respiration, allowing it to thrive in both oxygen-rich and low-oxygen environments. This adaptability is significant in various ecological niches, enabling the organism to survive in diverse conditions. The strain possesses a single replicon, which is indicative of its genetic organization and may influence aspects of its replication and gene expression. The genome of Grimontia hollisae strain NCTC11645 is accessible under the accession number UGHD00000000.1, providing a resource for further genomic studies and bioinformatics analyses. The physiological traits of Grimontia hollisae suggest its potential role in various ecological settings, particularly where nutrient cycling and microbial interactions are critical. As a facultative anaerobe, it may contribute to the degradation of organic materials in environments that fluctuate between aerobic and anaerobic conditions. Understanding the capabilities of Grimontia hollisae can enhance our knowledge of microbial diversity and function in different ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusGrimontia
SpeciesGrimontia hollisae
Strainstrain NCTC11645

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Grimontia hollisae strain NCTC11645 genome assembly, contig:

Gene Summary

Adenine Count

1028843 bp

Thymine Count

1023814 bp

Guanine Count

1022860 bp

Cytosine Count

999768 bp

Genome Length

4075285 bp

Protein-coding Genes

3568 genes

Non-Coding Genes

207 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thymidylate kinaseNCTC11645_01545Not AvailablePositive1613880 - 161451523463.1
dna polymerase iii subunit delta'NCTC11645_01546Not AvailablePositive1614505 - 161547335926.6
uncharacterized deoxyribonuclease ycfhNCTC11645_01547Not AvailablePositive1615561 - 161633429153.0
transcriptional regulator kdgrNCTC11645_01548Not AvailablePositive1616557 - 161733628993.1
alcohol dehydrogenaseNCTC11645_01549Not AvailableNegative1617393 - 161902160270.2
trap-type mannitol/chloroaromatic compound transport system, periplasmic componentNCTC11645_01550Not AvailablePositive1619380 - 162060645456.2
trap-type c4-dicarboxylate transport system, small permease componentNCTC11645_01551Not AvailablePositive1620708 - 162123520509.4
neu5ac permeaseNCTC11645_01552Not AvailablePositive1621250 - 162253945077.9
eiicb-glcNCTC11645_01553Not AvailablePositive1623057 - 162448749917.4
membrane protein of uncharacterised function (duf340)NCTC11645_01554Not AvailableNegative1624582 - 162548132087.2

Displaying genes 1581 – 1590 of 3775 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

84 records
Metabolite IDMetabolite nameStructureCAS number
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm0017395CDP-DG(16:0/18:1(9Z))C46H83N3O15P2Chemical structure of CDP-DG(16:0/18:1(9Z))NULL
Average980.124Da
Monoisotopic979.529942981Da

Displaying 1–10 of 84 metabolites

Health Effects

Health ConditionRelationReference
Severe gastroenteritisCausesPMC3897461
Hypovolemic shockCausesPMC3897461

Displaying health effects 1 – 2 of 2 in total